Stenglein Lab Standard Taxonomic Assessment
Contents:
Pipeline Summary
Input
Quality Assessment and Pre-Processing
Host Filtering
De novo Assembly of Reads
Taxonomic Assessment of Contigs
Output
Software Requirements
Installation Tutorial
Running the Pipeline
Configuration
Docker Profile
Usage
Example Analysis and Output
References
Stenglein Lab Standard Taxonomic Assessment
Docs
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Running the Pipeline
Running the Pipeline
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Configuration
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Docker Profile
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Usage
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